BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016H01LP1|AL427076
(277 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 540 e-154
>3x_Contig1782
Length = 24703
Score = 540 bits (272), Expect = e-154
Identities = 274/275 (99%)
Strand = Plus / Minus
Query: 1 gatcnagttgctatgcttgtgaaaaagggtccgtatgccttgaaatatactttaaaatcg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7296 gatcaagttgctatgcttgtgaaaaagggtccgtatgccttgaaatatactttaaaatcg 7237
Query: 61 gaatataaaaagttgaaggaagctgaaagagctgctacgcttggtgaattggcacaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7236 gaatataaaaagttgaaggaagctgaaagagctgctacgcttggtgaattggcacaacac 7177
Query: 121 gctgatccagaacaacagcagcagattcaagaccaatttgatcaacaacaacaacaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7176 gctgatccagaacaacagcagcagattcaagaccaatttgatcaacaacaacaacaggag 7117
Query: 181 aacgagcaagaggaggaagacttggaagacgtggaaatggaggatgtgttgtagaaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7116 aacgagcaagaggaggaagacttggaagacgtggaaatggaggatgtgttgtagaaccct 7057
Query: 241 tcaaacatagtatatatatatatatatatatatat 275
|||||||||||||||||||||||||||||||||||
Sbjct: 7056 tcaaacatagtatatatatatatatatatatatat 7022
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,785
Number of Sequences: 1807
Number of extensions: 10785
Number of successful extensions: 4202
Number of sequences better than 1.0e-20: 1
length of query: 277
length of database: 10,358,551
effective HSP length: 16
effective length of query: 261
effective length of database: 10,329,639
effective search space: 2696035779
effective search space used: 2696035779
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 49 (97.9 bits)